Hedgehog Signaling Pathway Database
 
Hedgehog, Drosophila melanogaster
Orthologs:Mus musculus, Homo sapiens, Danio rerio, Gallus gallus, Rattus norvegicus, Pan troglodytes, Achaearanea tepidariorum, Ambystoma mexicanum, Amblypharyngodon hornae, Anopheles gambiae, Artemia franciscana, Astyanax fasciatus, Bos taurus, Branchiostoma belcheri, Branchiostoma floridae, Carassius auratus, Ciona intestinalis, Coturnix coturnix, Cynops pyrrhogaster, Cyprinus carpio, Danio aequipinnatus, Danio aff, Danio devario, Danio frankei, Danio kerri, Danio malabaricus, Danio pathirana, Danio pulcher, Danio cf, Drosophila hydei, Drosophilia melangaster, Drosophila pseudoobscura, Eleutherodactylus coqui, Equus caballus, Euscorpius flavicaudis, Glomeris marginata, Gryllus bimaculatus, Helobdella robusta, Hemicentrotus pulcherrimus, Hirudo medicinalis, Hydra vulgaris, Ilyanassa obsoleta, Junonia coenia, Lampetra japonica, Lytechinus variegatus, Macaca fascicularis, Meriones unguiculatus, Notophthalmus viridescens, Onchorhynchus mykiss, Oryzias latipes, Paralichthys olivaceus, Patella vulgata, Pleurodeles waltl, Pseudorasbora parva, Puntius conchonius, Puntius tetrazona, Rana catesbeiana, Rasbora elegans, Rasbora heteromorpha, Rasbora paviei, Saimiri boliviensis, Scyliorhinus canicula, Suncus murinus, Strongylocentrotus purpuratus, Takifugu rubripes, Tanichthys albonubes, Trachemys scripta, Tribolium castaneum, Trionyx sinensis, Xenopus lavis,
Related subclasses:
Synonyms:hh, hg, Mir,moonrat, Mrt, Mirabile, bar, bar3, CG4637, l(3)hh, l(3)neo56, l(3)neo57
OverviewInteractive Fly
SequencesmRNA: NCBI
protein: NCBI, SwissProt
Genomic OrganizationChromosome 3R: UCSC genome, Flybase

Transcript structure:

source: Ensembl
3D Structure ModelsNCBI: Cn3D To download Cn3D at NCBI
Protein MotifsHedgehog, Hint, intein, endopeptidase
Size
BubblogramUnknown region: 1 to 10 low complexity region: 11 to 25 Unknown region: 26 to 34 Pfam:HH_signal: 35 to 194 Unknown region: 195 to 205 HintN: 206 to 309 HintC: 312 to 356 Unknown: 357 to 421

Source: SMART


BLAST
Protein Family: pfam
Protein Sub-domains: InterPro
Phenotypes & DiseasesFlybase mutations
Reagentshh pathway: RNAi
Dros. Genomics Resource Center
Microarray DataNCBI: GEO profile
Internat. Dros. Array Consort.
RNAiProbes: GenomeRNAi dkfz
ReferencesFlybase
PubMed
Database LinksFlyGrid
Flybase full report
UCSC genome report
Ensembl GeneView
     

Last updated 28-Aug-2006

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