Hedgehog Signaling Pathway Database
 
cubitus interruptus, Drosophila melanogaster
Orthologs:Mus musculus, Homo sapiens, Danio rerio,
Related subclasses:
Synonyms:ci, ci155, ciD, Cell, Ce, Ce: Cell, cubitus interruptus-dominant, CG2125, l(4)13, l(4)17, l(4)102ABc
OverviewInteractive fly
SequencesmRNA:GenBank
protein: NCBI, SwissProt
Genomic OrganizationChromosome 4:UCSC Genome, Flybase

Transcript structure:

source: Ensembl
Protein Motifstranscription factor, zinc finger GLI C2H2
Size
Bubblogramsignal peptide: 1 to 41 low complexity region: 46 to 61 Unknown region: 62 to 87 low complexity region: 88 to 101 Unknown region: 102 to 157 low complexity region: 158 to 167 low complexity region: 172 to 179 Unknown region: 180 to 244 low complexity region: 245 to 261 Unknown region: 262 to 450 ZnF_C2H2: 451 to 476 Unknown region: 477 to 483 ZnF_C2H2: 484 to 511 ZnF_C2H2: 517 to 541 ZnF_C2H2: 547 to 572 ZnF_C2H2: 578 to 603 Unknown region: 604 to 656 low complexity region: 657 to 670 Unknown region: 671 to 694 low complexity region: 695 to 717 Unknown region: 718 to 848 low complexity region: 849 to 863 Unknown region: 864 to 938 low complexity region: 939 to 947 Unknown: 948 to 1397

Source: SMART


BLAST
Protein Protein Family: sanger pfam
Protein Sub-domains: pfam, Interpro
Phenotypes & DiseasesFlybase mutations
ReagentsDros. Genomics Resource Center
Microarray DataNCBI: GEO profile
Internat. Dros. Array Consort.
RNAiProbes: GenomeRNAi dkfz
ReferencesFlybase
PubMed
Database LinksFlyGrid
Flybase full report
UCSC genome report
Ensembl GeneView
     

Last updated 28-Aug-2006

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